Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866820.1_cds_XP_016432880.1_29084
CDS Infomation

[gene=LOC107759451] [db_xref=GeneID:107759451] [protein=transcription factor IIIB 60 kDa subunit-like] [protein_id=XP_016432880.1] [location=complement(join(47158..47685,47739..48430,49236..49785))] [gbkey=CDS]
Sequence

ATGGTGTGGTGTAGTAACTGTGAAGAGAACAGGGAACCCGCGACTCTGGATGGTAAAATA
TGTTGTTCCTATTGTGGAAAAGTTCTTTTCGAAGATAATATGTCAACTGAGCCAACTTTC
TTTAAGAATGCTGCTGGACAGAGCCAATTGTCAGGAAAACTTGTGCGCTCTGTCCAAAGT
GATTATTCAGTTTCACGTCAAAGAGCAATAGATGAAGCATATAATGATATAGAGAGTATG
GGATATGCATTAGGAATTGACGGTGGTGAATCAATATATAGTCCGGCGTCGCGTCTTTAT
ACGATAGCACTTGAGAGGAATTTCACAAGGGGCCGTAGGAAAGAGCAAGTTGAGGCTGCT
TGTCTTTATATTACATGTAGGCATAACAATAAGCCATTCCTACTCATTGATTTTTCTGAG
TACTTGAGGATAAATGTGTATGTTTTAGGTGCTGTTTTCCTACAGCTTTGCAAACTTCTA
AGCCTTGAACATGATCCGATTGTTCAAAAACCTGTGGATCCTAGCCTTTTCATTCATCGA
TTCACTGATCATAAGAAGTACTATACAGGAAATAACAACAACAGGAAGACGAATATATCT
AGAACTGCACTTCACATTGTGGCAAGCATGAAGCGAGATTGGATGCAGACGGGGAGAAAG
CCAAGTGGAGTATGTGGAGCTGCACTTTATATTGCTGCTCTTTCAGATGGACTGAGTTGT
TCTAAATCAGAAATTATCAAAGTCGTGCATATTTGTGAAGCAACATTGACAAAGCGATTG
ATTGAATTTGAAAACACAGAATCTGGGAGCTTAACGATTGATGAGTTAAATACAAGAGCT
CAGGAGCTTGAGAAAGAAGAGAGGCTAACCCTGCAACTTTATTCCAGGTCAAAAGGATCT
GGGATCACAGAAGTGCTATGTGAAAACAAGAAAAGTGTGGAGCTGCCCTTTGCCCATGGT
CTATGTGAAAGTTGTTACATTGATTTTGTAAAACTTTCAGGTGGGATTGATGGAGGATCT
GAACCTCCCGCCTTCCAACGCGCTGAGAAAGAAAGATTAATGGCAAAGGAAGCTGCTGAA
GACCCAAATTTTCCCATGTCCAATCAGGTGGAGAACAATGGCCGCGAGTATTTGGAGCCT
GAAAAGGGAGAACAAGTGCAGATATCAGGCTCTGAGCATAATGCGAGTTGTGATACATTA
CATGGCACGGAATGTATGGGTCCTGATAAACTGATGAATCAAGAGGAGAAGCATTACAAA
GAGATCATTTGGGTAAAAATGAACTGGGAATATGAGGAACAAGCAGCTAAGGAAGCAGCT
GCATTAGCTGCACAGAAGGCTTACGAGGAGTCCATTTTAGCTAACTGTTCCGAAGATGTG
CAAGCTGCACAGAAGCTTGCTACTGATGCTGCCGCCGCTGTTGCAAAATCAAGAAAGGAA
AAACGAGAGAAAAGGGCTGCAGAACTGAAAAACTCCGGTCCTGCTCAAACCGCTGCAGAA
GCAACGAAGCAAATGTTAACTAAAAAAAGGCTGAGCTCTAAGATTAACTATGATTTGCTA
GAGAAGCTTTTCGATGAAACTGCAATACCTGAGAATCCAAAAAAGGTCAGGAAGGTGGAT
GATTCAACGGATGATAACGTGGTAAAGATCAGCAAAATTGATCCGGAAGTAGAAGAGACT
AATGAAGAAGCATTTGGCGAGCATCTGCAGTATGATGGAGATGACGGAGGATATGACTAT
GATCAACAATATGATTATGATGAGTATTGA

Peptide Sequence

PEP ID

XP_016432880.1
PEP Infomation

PREDICTED: transcription factor IIIB 60 kDa subunit-like [Nicotiana tabacum]
Sequence

MVWCSNCEENREPATLDGKICCSYCGKVLFEDNMSTEPTFFKNAAGQSQLSGKLVRSVQS
DYSVSRQRAIDEAYNDIESMGYALGIDGGESIYSPASRLYTIALERNFTRGRRKEQVEAA
CLYITCRHNNKPFLLIDFSEYLRINVYVLGAVFLQLCKLLSLEHDPIVQKPVDPSLFIHR
FTDHKKYYTGNNNNRKTNISRTALHIVASMKRDWMQTGRKPSGVCGAALYIAALSDGLSC
SKSEIIKVVHICEATLTKRLIEFENTESGSLTIDELNTRAQELEKEERLTLQLYSRSKGS
GITEVLCENKKSVELPFAHGLCESCYIDFVKLSGGIDGGSEPPAFQRAEKERLMAKEAAE
DPNFPMSNQVENNGREYLEPEKGEQVQISGSEHNASCDTLHGTECMGPDKLMNQEEKHYK
EIIWVKMNWEYEEQAAKEAAALAAQKAYEESILANCSEDVQAAQKLATDAAAAVAKSRKE
KREKRAAELKNSGPAQTAAEATKQMLTKKRLSSKINYDLLEKLFDETAIPENPKKVRKVD
DSTDDNVVKISKIDPEVEETNEEAFGEHLQYDGDDGGYDYDQQYDYDEY

Transcript Sequence

Gene sequence data has not been registered.